Similar HOG based on pairwise relations to

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

HOG:E0781394 with 3 members (inhibitor of Bruton tyrosine kinase)

Eumetazoa / Bilateria / Deuterostomia / Chordata / Vertebrata / Gnathostomata / Euteleostomi /

... /

Sarcopterygii / Tetrapoda / Amniota / Mammalia / Theria / Eutheria /

Afrotheria

Completeness score: 1.00

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This HOG has 29 similar HOGs:

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Rank	HOG ID	Shared orthologs	HOG size	Description
1	HOG:E0781394	436	269	inhibitor of Bruton tyrosine kinase
2	HOG:E0781394.3b	127	59	inhibitor of Bruton tyrosine kinase
3	HOG:E0781394.9b	66	22	inhibitor of Bruton tyrosine kinase
4	HOG:E0781394.2a	34	13	inhibitor of Bruton tyrosine kinase
5	HOG:E0478533.1a	22	116	BTB domain-containing protein
6	HOG:E0478533	19	205	BTB domain-containing protein
7	HOG:E0478533.1b	13	32	BTB domain-containing protein
8	HOG:E0781394.6b	6	2	inhibitor of Bruton tyrosine kinase
9	HOG:E0781394.6a	6	2	inhibitor of Bruton tyrosine kinase
10	HOG:E0793601	5	9	BTB domain-containing protein
11	HOG:E0781394.9a	5	2	inhibitor of Bruton tyrosine kinase
12	HOG:E0337843	4	5	BTB domain-containing protein
13	HOG:E0781394.8b	3	1	inhibitor of Bruton tyrosine kinase
14	HOG:E0781394.8a	3	1	inhibitor of Bruton tyrosine kinase
15	HOG:E0781394.7b	3	1	inhibitor of Bruton tyrosine kinase
16	HOG:E0781394.7a	3	1	inhibitor of Bruton tyrosine kinase
17	HOG:E0781394.5b	3	1	inhibitor of Bruton tyrosine kinase
18	HOG:E0781394.5a	3	1	inhibitor of Bruton tyrosine kinase
19	HOG:E0781394.4b	3	1	inhibitor of Bruton tyrosine kinase
20	HOG:E0781394.4a	3	1	inhibitor of Bruton tyrosine kinase
21	HOG:E0781394.1a	3	1	inhibitor of Bruton tyrosine kinase
22	HOG:E0781394.3b.3c	2	1	inhibitor of Bruton tyrosine kinase
23	HOG:E0781394.3b.3b	2	1	inhibitor of Bruton tyrosine kinase
24	HOG:E0781394.3b.3a	2	1	inhibitor of Bruton tyrosine kinase
25	HOG:E0781394.3b.2b	2	1	inhibitor of Bruton tyrosine kinase

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